Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH57851.1 | SEH95239.1 | BAZSYMB_SCAFFOLD00004_55 | BAZSYMB_SCAFFOLD00029_1 | Protein methyltransferase HemK. | Translation factor Sua5; Belongs to the SUA5 family. | 0.400 |
SEH95226.1 | SEH95239.1 | BAZSYMB_SCAFFOLD00029_0 | BAZSYMB_SCAFFOLD00029_1 | alanyl-tRNA synthetase. | Translation factor Sua5; Belongs to the SUA5 family. | 0.671 |
SEH95226.1 | SEH95251.1 | BAZSYMB_SCAFFOLD00029_0 | BAZSYMB_SCAFFOLD00029_2 | alanyl-tRNA synthetase. | Metal-dependent phosphoesterase, PHP family. | 0.672 |
SEH95226.1 | SEH95262.1 | BAZSYMB_SCAFFOLD00029_0 | BAZSYMB_SCAFFOLD00029_3 | alanyl-tRNA synthetase. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.503 |
SEH95226.1 | SEH95273.1 | BAZSYMB_SCAFFOLD00029_0 | BAZSYMB_SCAFFOLD00029_4 | alanyl-tRNA synthetase. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.457 |
SEH95239.1 | SEH57851.1 | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00004_55 | Translation factor Sua5; Belongs to the SUA5 family. | Protein methyltransferase HemK. | 0.400 |
SEH95239.1 | SEH95226.1 | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00029_0 | Translation factor Sua5; Belongs to the SUA5 family. | alanyl-tRNA synthetase. | 0.671 |
SEH95239.1 | SEH95251.1 | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00029_2 | Translation factor Sua5; Belongs to the SUA5 family. | Metal-dependent phosphoesterase, PHP family. | 0.868 |
SEH95239.1 | SEH95262.1 | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00029_3 | Translation factor Sua5; Belongs to the SUA5 family. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.579 |
SEH95239.1 | SEH95273.1 | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00029_4 | Translation factor Sua5; Belongs to the SUA5 family. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.521 |
SEH95239.1 | trmB | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00022_6 | Translation factor Sua5; Belongs to the SUA5 family. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.410 |
SEH95239.1 | tsaD | BAZSYMB_SCAFFOLD00029_1 | BAZSYMB_SCAFFOLD00085_3 | Translation factor Sua5; Belongs to the SUA5 family. | tRNA threonylcarbamoyladenosine biosynthesisprotein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.418 |
SEH95251.1 | SEH95226.1 | BAZSYMB_SCAFFOLD00029_2 | BAZSYMB_SCAFFOLD00029_0 | Metal-dependent phosphoesterase, PHP family. | alanyl-tRNA synthetase. | 0.672 |
SEH95251.1 | SEH95239.1 | BAZSYMB_SCAFFOLD00029_2 | BAZSYMB_SCAFFOLD00029_1 | Metal-dependent phosphoesterase, PHP family. | Translation factor Sua5; Belongs to the SUA5 family. | 0.868 |
SEH95251.1 | SEH95262.1 | BAZSYMB_SCAFFOLD00029_2 | BAZSYMB_SCAFFOLD00029_3 | Metal-dependent phosphoesterase, PHP family. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.568 |
SEH95251.1 | SEH95273.1 | BAZSYMB_SCAFFOLD00029_2 | BAZSYMB_SCAFFOLD00029_4 | Metal-dependent phosphoesterase, PHP family. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.508 |
SEH95262.1 | SEH95226.1 | BAZSYMB_SCAFFOLD00029_3 | BAZSYMB_SCAFFOLD00029_0 | Glucosamine--fructose-6-phosphateaminotransferas e. | alanyl-tRNA synthetase. | 0.503 |
SEH95262.1 | SEH95239.1 | BAZSYMB_SCAFFOLD00029_3 | BAZSYMB_SCAFFOLD00029_1 | Glucosamine--fructose-6-phosphateaminotransferas e. | Translation factor Sua5; Belongs to the SUA5 family. | 0.579 |
SEH95262.1 | SEH95251.1 | BAZSYMB_SCAFFOLD00029_3 | BAZSYMB_SCAFFOLD00029_2 | Glucosamine--fructose-6-phosphateaminotransferas e. | Metal-dependent phosphoesterase, PHP family. | 0.568 |
SEH95262.1 | SEH95273.1 | BAZSYMB_SCAFFOLD00029_3 | BAZSYMB_SCAFFOLD00029_4 | Glucosamine--fructose-6-phosphateaminotransferas e. | Glucosamine--fructose-6-phosphateaminotransferas e. | 0.992 |
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