STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltKPutative ABC-type amino-acid transporter permease protein. (219 aa)    
Predicted Functional Partners:
glnQ_2
ABC-type amino-acid transporter; ATP-binding protein.
 0.997
HH_1481
Probable ABC-type amino-acid transporter periplasmic solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.996
HH_1482
Putative ABC-type amino-acid transporter permease protein.
 
 
 
0.993
glnQ_1
Conserved hypothetical protein; Similar to amino acid ABC transporter ATP binding components.
 
 
 0.910
HH_0738
Amino-acid ABC transporter periplasmic solute-binding protein.
 
 
 0.786
glnP
Glutamine ABC transporter permease GlnP.
 
 
 
0.659
putP
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.583
HH_0346
Conserved hypothetical protein; Similar to amino acid ABC transporter permeases.
  
  
 
0.509
HH_0156
Conserved hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.472
gltA
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.406
Your Current Organism:
Helicobacter hepaticus
NCBI taxonomy Id: 235279
Other names: H. hepaticus ATCC 51449, Helicobacter hepaticus ATCC 51449, Helicobacter hepaticus str. ATCC 51449
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.