STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oorDOorD subunit of 2-oxoglutarate:acceptor oxidoreductase. (103 aa)    
Predicted Functional Partners:
oorC
OorC subunit of 2-oxoglutarate:acceptor oxidoreductase.
 
 
 0.996
oorA
OorA subunit of 2-oxoglutarate:acceptor oxidoreductase.
 
 
 0.995
oorB
OorB subunit of 2-oxoglutarate:acceptor oxidoreductase.
 
 
 0.994
HH_1196
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.987
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
  
  
 0.959
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.824
HH_0605
Conserved hypothetical protein; Similar to Aquifex aeolicus AQ_103.
  
  
  0.822
HH_1671
Conserved hypothetical protein; Possible aspartate aminotransferase.
    
  0.806
HH_0017
Aspartate oxidase.
     
  0.800
fumC
Fumarase.
     
  0.800
Your Current Organism:
Helicobacter hepaticus
NCBI taxonomy Id: 235279
Other names: H. hepaticus ATCC 51449, Helicobacter hepaticus ATCC 51449, Helicobacter hepaticus str. ATCC 51449
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.