STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK0360Nucleoside-diphosphate-sugar pyrophosphorylase. (347 aa)    
Predicted Functional Partners:
GK0363
Phosphomannomutase.
 
 
 0.988
GK3304
Mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase).
  
 
 0.963
GK0361
Similar to N-terminal region of hypothetical protein (bll5144 761 aa) of Bradyrhizobium japonicum (GK0361 and GK0362 are divided by frame shift).
 
 
 0.879
GK0362
Similar to C-terminal region of hypothetical protein (bll5144 761 aa) of Bradyrhizobium japonicum (GK0361 and GK0362 are divided by frame shift).
 
     0.842
GK3128
dTDP-glucose 4,6-dehydratase.
 
 
 0.646
GK3127
Aminotransferase (degT family); Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.587
GK3168
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.587
GK0839
NDP-sugar epimerase.
 
 
 0.561
glmM
Phosphoglucomutase (glycolysis); Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
  
 0.557
GK0359
Dehydrogenase.
  
    0.514
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.