STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK0528Phage-terminase large subunit. (571 aa)    
Predicted Functional Partners:
GK0529
Phage-related head portal protein.
 
   
 0.949
GK0526
Phage-related protein.
 
  
 0.945
GK0530
Serine protease (phage related-protein, ClpP family); Belongs to the peptidase S14 family.
 
   
 0.899
GK0536
Phage-related protein.
 
   
 0.835
GK0539
Bacteriophage-related protein.
 
     0.832
GK0527
Hypothetical protein.
       0.798
GK0531
Hypothetical conserved protein.
       0.736
GK0534
Phage-related protein.
  
    0.694
GK0532
Phage-related protein.
       0.693
GK0535
Phage-related protein.
       0.693
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.