STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK0879Hypothetical conserved protein. (185 aa)    
Predicted Functional Partners:
GK0880
Transposase of IS1604-like element.
 
     0.809
GK0881
Hypothetical conserved protein.
 
     0.794
GK0161
Hypothetical protein; Similar to N-terminal region of transposase (CDC1551 417 aa) of Mycobacterium tuberculosis (GK0158 and GK0161 are divided by IS-like element (GK0159 and GK0160)).
  
     0.747
GK3260
Hypothetical protein.
  
     0.734
GK3325
Hypothetical conserved protein.
  
     0.727
GK3259
Hypothetical protein.
  
     0.721
GK1993
Phenylacetic acid catabolism protein.
  
     0.705
GK0983
Hypothetical protein.
  
     0.696
GK1415
Hypothetical protein.
  
     0.693
GK0780
Transposase of IS1604-like element.
  
     0.643
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.