Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK1543 | GK1544 | GK1543 | GK1544 | Hypothetical conserved protein; Belongs to the methyltransferase superfamily. | ATP-dependent helicase. | 0.660 |
GK1544 | GK1543 | GK1544 | GK1543 | ATP-dependent helicase. | Hypothetical conserved protein; Belongs to the methyltransferase superfamily. | 0.660 |
GK1544 | GK1688 | GK1544 | GK1688 | ATP-dependent helicase. | DNA topoisomerase III. | 0.634 |
GK1544 | GK2104 | GK1544 | GK2104 | ATP-dependent helicase. | DNA/RNA helicase. | 0.932 |
GK1544 | polA | GK1544 | GK2730 | ATP-dependent helicase. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.916 |
GK1544 | recQ | GK1544 | GK2243 | ATP-dependent helicase. | ATP-dependent DNA helicase. | 0.582 |
GK1544 | rpoA | GK1544 | GK0133 | ATP-dependent helicase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.896 |
GK1544 | rpoB | GK1544 | GK0098 | ATP-dependent helicase. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.890 |
GK1544 | rpoZ | GK1544 | GK1168 | ATP-dependent helicase. | DNA-directed RNA polymerase omega subunit (transcriptase omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.898 |
GK1544 | sbcD | GK1544 | GK0683 | ATP-dependent helicase. | DNA repair exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.840 |
GK1544 | topA | GK1544 | GK1211 | ATP-dependent helicase. | DNA topoisomerase I (omega-protein) (relaxing enzyme) (untwisting enzyme); Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes pass [...] | 0.634 |
GK1688 | GK1544 | GK1688 | GK1544 | DNA topoisomerase III. | ATP-dependent helicase. | 0.634 |
GK1688 | polA | GK1688 | GK2730 | DNA topoisomerase III. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.772 |
GK1688 | recQ | GK1688 | GK2243 | DNA topoisomerase III. | ATP-dependent DNA helicase. | 0.985 |
GK1688 | rpoA | GK1688 | GK0133 | DNA topoisomerase III. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.868 |
GK1688 | rpoB | GK1688 | GK0098 | DNA topoisomerase III. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.447 |
GK1688 | sbcD | GK1688 | GK0683 | DNA topoisomerase III. | DNA repair exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.647 |
GK1688 | topA | GK1688 | GK1211 | DNA topoisomerase III. | DNA topoisomerase I (omega-protein) (relaxing enzyme) (untwisting enzyme); Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes pass [...] | 0.465 |
GK2104 | GK1544 | GK2104 | GK1544 | DNA/RNA helicase. | ATP-dependent helicase. | 0.932 |
GK2104 | polA | GK2104 | GK2730 | DNA/RNA helicase. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.978 |
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