STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK1626Spore germination protein. (367 aa)    
Predicted Functional Partners:
GK1625
Spore germination protein.
 
  
 0.920
GK1624
Spore germination protein.
 
  
 0.907
GK1100
Hypothetical conserved protein.
  
   
 0.592
spoIIIAB
Stage III sporulation protein AB.
  
     0.546
spoIIIAE
Stage III sporulation protein AE.
  
     0.544
GK0970
Hypothetical conserved protein.
  
     0.537
spoIIM
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
   
 0.530
GK2495
Hypothetical conserved protein.
  
     0.528
GK2304
Stage V sporulation protein AD.
  
  
 0.520
GK1617
Spore germination protein.
 
  
 0.509
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.