Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK0870 | GK1824 | GK0870 | GK1824 | Glycosyltransferase. | Hypothetical protein. | 0.856 |
GK0870 | GK2636 | GK0870 | GK2636 | Glycosyltransferase. | Hypothetical protein. | 0.417 |
GK0870 | polA | GK0870 | GK2730 | Glycosyltransferase. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.515 |
GK1041 | GK1824 | GK1041 | GK1824 | Hypothetical conserved protein. | Hypothetical protein. | 0.856 |
GK1041 | GK2054 | GK1041 | GK2054 | Hypothetical conserved protein. | Hypothetical conserved protein. | 0.797 |
GK1041 | GK2636 | GK1041 | GK2636 | Hypothetical conserved protein. | Hypothetical protein. | 0.417 |
GK1041 | polA | GK1041 | GK2730 | Hypothetical conserved protein. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.515 |
GK1824 | GK0870 | GK1824 | GK0870 | Hypothetical protein. | Glycosyltransferase. | 0.856 |
GK1824 | GK1041 | GK1824 | GK1041 | Hypothetical protein. | Hypothetical conserved protein. | 0.856 |
GK1824 | GK2054 | GK1824 | GK2054 | Hypothetical protein. | Hypothetical conserved protein. | 0.856 |
GK1824 | GK2636 | GK1824 | GK2636 | Hypothetical protein. | Hypothetical protein. | 0.883 |
GK1824 | GK3140 | GK1824 | GK3140 | Hypothetical protein. | Hypothetical conserved protein. | 0.906 |
GK1824 | alaS | GK1824 | GK2556 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.916 |
GK1824 | dnaK | GK1824 | GK2504 | Hypothetical protein. | Chaperone protein (heat shock protein 70) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.943 |
GK1824 | polA | GK1824 | GK2730 | Hypothetical protein. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.973 |
GK1824 | rpoA | GK1824 | GK0133 | Hypothetical protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.881 |
GK1824 | rpoB | GK1824 | GK0098 | Hypothetical protein. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.857 |
GK2054 | GK1041 | GK2054 | GK1041 | Hypothetical conserved protein. | Hypothetical conserved protein. | 0.797 |
GK2054 | GK1824 | GK2054 | GK1824 | Hypothetical conserved protein. | Hypothetical protein. | 0.856 |
GK2054 | GK2636 | GK2054 | GK2636 | Hypothetical conserved protein. | Hypothetical protein. | 0.417 |
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