Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GK1468 | GK1938 | GK1468 | GK1938 | Hypothetical conserved protein. | Methyl-accepting chemotaxis protein. | 0.865 |
GK1468 | GK2346 | GK1468 | GK2346 | Hypothetical conserved protein. | Chemotaxis protein. | 0.960 |
GK1468 | cheA | GK1468 | GK1242 | Hypothetical conserved protein. | Two-component sensor histidine kinase (chemotaxis protein). | 0.978 |
GK1468 | cheB | GK1468 | GK1241 | Hypothetical conserved protein. | Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.942 |
GK1468 | cheD | GK1468 | GK1245 | Hypothetical conserved protein. | Protein required for methylation of methyl-accepting chemotaxis protein (MCPs); Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.589 |
GK1468 | cheR | GK1468 | GK2208 | Hypothetical conserved protein. | Chemotactic methyltransferase. | 0.973 |
GK1468 | cheW | GK1468 | GK1243 | Hypothetical conserved protein. | Chemotaxis signal transduction protein. | 0.961 |
GK1468 | cheY | GK1468 | GK1232 | Hypothetical conserved protein. | Two-component response regulator involved in modulation of flagellar. | 0.865 |
GK1468 | fliY | GK1468 | GK1231 | Hypothetical conserved protein. | Flagellar motor switch protein. | 0.908 |
GK1938 | GK1468 | GK1938 | GK1468 | Methyl-accepting chemotaxis protein. | Hypothetical conserved protein. | 0.865 |
GK1938 | GK1939 | GK1938 | GK1939 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.773 |
GK1938 | GK2346 | GK1938 | GK2346 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.917 |
GK1938 | cheA | GK1938 | GK1242 | Methyl-accepting chemotaxis protein. | Two-component sensor histidine kinase (chemotaxis protein). | 0.956 |
GK1938 | cheB | GK1938 | GK1241 | Methyl-accepting chemotaxis protein. | Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.849 |
GK1938 | cheD | GK1938 | GK1245 | Methyl-accepting chemotaxis protein. | Protein required for methylation of methyl-accepting chemotaxis protein (MCPs); Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.787 |
GK1938 | cheR | GK1938 | GK2208 | Methyl-accepting chemotaxis protein. | Chemotactic methyltransferase. | 0.853 |
GK1938 | cheW | GK1938 | GK1243 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.921 |
GK1938 | cheY | GK1938 | GK1232 | Methyl-accepting chemotaxis protein. | Two-component response regulator involved in modulation of flagellar. | 0.699 |
GK1938 | fliY | GK1938 | GK1231 | Methyl-accepting chemotaxis protein. | Flagellar motor switch protein. | 0.667 |
GK1939 | GK1938 | GK1939 | GK1938 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.773 |
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