STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK2748Hypothetical conserved protein. (102 aa)    
Predicted Functional Partners:
GK2193
Hypothetical conserved protein.
  
     0.772
ctaF
Cytochrome c oxidase subunit IV.
  
    0.768
GK2950
Hypothetical conserved protein.
  
     0.761
GK0147
KinB signaling pathway activation protein.
  
     0.753
GK1089
Hypothetical conserved protein.
  
     0.752
GK0479
Hypothetical conserved protein.
  
     0.744
GK2437
Hypothetical conserved protein.
  
     0.738
GK1076
Hypothetical conserved protein.
  
     0.734
GK1071
Hypothetical conserved protein.
  
     0.733
GK2218
Hypothetical conserved protein.
  
     0.731
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.