STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GK2892Hypothetical conserved protein. (111 aa)    
Predicted Functional Partners:
GK2893
N-methylhydantoinase B (ATP-hydrolyzing).
 
     0.937
GK2894
N-methylhydantoinase A.
 
    0.931
GK2895
Hypothetical conserved protein.
 
  
 0.874
GK2897
Hydantoin racemase.
 
     0.757
GK2891
Hypothetical protein; Similar to N-terminal region of X aa-pro aminopeptidase (pepQ-3 355 aa) of Pyrococcus abyssi (GK2891 and GK2890 are divided by frame shift).
  
  
 0.606
GK2896
Sugar transporter.
 
  
 0.518
GK3289
Hypothetical conserved protein.
  
     0.503
GK2890
Hypothetical protein; Similar to C-terminal region of X aa-pro aminopeptidase (pepQ-3 355 aa) of Pyrococcus abyssi (GK2891 and GK2890 are divided by frame shift); Belongs to the peptidase M24B family.
  
  
 0.494
GK2888
Hypothetical protein; Similar to N-terminal region of proline oxidase (proline dehydrohenase) (BH2740 306 aa) of Bacillus halodurans.
 
     0.493
GK2889
Pyrroline-5 carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.481
Your Current Organism:
Geobacillus kaustophilus
NCBI taxonomy Id: 235909
Other names: G. kaustophilus HTA426, Geobacillus kaustophilus HTA426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.