STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK27347.1Protein of unknown function. (188 aa)    
Predicted Functional Partners:
SEK27320.1
Fructose-1,6-bisphosphatase II.
     
 0.806
SEL61567.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.722
SEM83900.1
TadE-like protein.
  
     0.669
SEM76481.1
DNA-binding transcriptional activator of the SARP family.
  
     0.652
SEM83950.1
LysM domain-containing protein.
  
     0.634
SEL80132.1
LysM domain-containing protein.
  
     0.615
SEK29865.1
UvrD-like helicase C-terminal domain-containing protein; Belongs to the helicase family. UvrD subfamily.
  
     0.534
SEL80311.1
Hypothetical protein.
  
     0.534
SEK27163.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.532
SEM80735.1
Hypothetical protein.
  
     0.531
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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