STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK30497.1PDZ domain-containing protein. (356 aa)    
Predicted Functional Partners:
SEK30465.1
Hypothetical protein.
       0.791
SEK30441.1
Molybdopterin synthase catalytic subunit.
       0.708
sepF
Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
     0.630
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.618
SEK30361.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
       0.612
whiB-8
WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.600
SEK30381.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
 
     0.567
SEM05841.1
DNA helicase IV.
  
     0.542
SEM41563.1
MerR HTH family regulatory protein.
  
     0.530
SEL68720.1
DNA polymerase III, delta subunit.
 
     0.527
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.