STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK21187.1Uncharacterized protein, contains SIS (Sugar ISomerase) phosphosugar binding domain. (249 aa)    
Predicted Functional Partners:
SEK21203.1
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator.
       0.755
SEL38049.1
Phosphotriesterase-related protein.
 
     0.528
SEK21162.1
Protein of unknown function.
       0.490
SEL66727.1
6-phospho-beta-glucosidase.
  
     0.482
SEL91579.1
DNA-binding transcriptional regulator, GntR family.
 
     0.459
SEK31504.1
GntR family transcriptional regulator.
 
     0.455
SEL66712.1
BadF-type ATPase.
 
     0.445
SEL93058.1
GntR family transcriptional regulator.
 
     0.443
SEL60065.1
GntR family transcriptional regulator.
 
     0.432
SEM69329.1
GntR family transcriptional regulator.
 
     0.429
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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