STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK43467.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
SEK51369.1
Clp amino terminal domain-containing protein, pathogenicity island component.
  
 
 0.988
SEL30530.1
Acyl transferase domain-containing protein.
  
 
 0.967
SEK24720.1
Protein of unknown function.
  
 0.964
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.964
SEL48933.1
Hypothetical protein.
  
 0.964
SEL57902.1
Hsp70 protein.
  
 0.964
SEL04106.1
Protein phosphatase.
  
 
 0.961
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.956
rplQ
Large subunit ribosomal protein L17.
  
   0.956
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
 
 0.955
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.