STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK45843.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (119 aa)    
Predicted Functional Partners:
SEM64481.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.993
SEK45870.1
Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.
 
 0.986
SEL51399.1
PAS domain S-box-containing protein.
 
 0.984
SEK85255.1
Signal transduction histidine kinase.
 
 0.983
SEL16101.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.980
SEL26414.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 0.973
SEM17962.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 0.972
SEL80961.1
Sodium/proline symporter.
 
0.971
SEM19717.1
PAS domain S-box-containing protein.
 
0.971
SEM42636.1
GAF domain-containing protein.
 
0.970
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.