STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK86853.1DNA-binding transcriptional regulator, MarR family. (177 aa)    
Predicted Functional Partners:
SEK86827.1
SnoaL-like domain-containing protein.
       0.773
SEM26609.1
PTS system, beta-glucosides-specific IIC component.
   
 
 0.759
SEK86808.1
Acyl-CoA carboxylase epsilon subunit.
       0.536
SEK86779.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
    0.522
SEK86696.1
Bifunctional hydroxylase/dehydrase.
  
    0.519
SEK86733.1
Alpha/beta hydrolase family protein.
       0.519
SEK86762.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.519
SEK86876.1
4-hydroxyphenylpyruvate dioxygenase.
  
    0.502
SEK86896.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
       0.475
SEK86914.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
       0.475
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.