STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK87324.1Siderophore synthetase component. (691 aa)    
Predicted Functional Partners:
SEK87370.1
Lysine N6-hydroxylase.
 
 0.930
SEK87298.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.929
SEK87346.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.900
SEL98713.1
Lysine N6-hydroxylase.
 
 0.888
SEK91325.1
L-ornithine N5-oxygenase.
 
 
 0.784
SEK87274.1
2,4-diaminobutyrate 4-transaminases.
     0.769
SEL98693.1
Siderophore synthetase component.
  
 
0.660
SEL98727.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.632
SEL30530.1
Acyl transferase domain-containing protein.
  
 
 0.501
SEK66158.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.483
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.