STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL27864.1Anti-sigma B factor antagonist. (122 aa)    
Predicted Functional Partners:
SEL16101.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.966
SEL51399.1
PAS domain S-box-containing protein.
  
 0.966
SEL80961.1
Sodium/proline symporter.
  
 0.966
SEM19717.1
PAS domain S-box-containing protein.
  
 0.966
SEM42636.1
GAF domain-containing protein.
  
 0.966
SEK45843.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.957
SEK85230.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.957
SEK30078.1
Histidine kinase-like ATPase domain-containing protein.
  
 0.951
SEK73293.1
PAS fold.
  
 0.951
SEL14176.1
Histidine kinase-like ATPase domain-containing protein.
  
 0.951
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
Server load: low (22%) [HD]