STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL26522.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SEL26496.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.703
SEK67804.1
Protein of unknown function.
  
     0.587
SEM63705.1
DDE superfamily endonuclease.
  
     0.578
SEM08322.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
  
    0.568
SEM69961.1
Transposase.
  
     0.563
SEK46205.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.465
SEK52500.1
Hypothetical protein.
  
     0.457
SEM05533.1
Alpha/beta hydrolase.
  
     0.454
SEL26576.1
Hypothetical protein.
       0.448
SEL86960.1
Predicted metal-dependent peptidase.
  
     0.447
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.