STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL26714.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (145 aa)    
Predicted Functional Partners:
SEL26657.1
Gas vesicle protein.
 
   
 0.975
SEL26685.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.975
SEL26732.1
Gas vesicle protein G.
 
   
 0.974
SEL26765.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.974
SEL26823.1
Gas vesicle synthesis protein GvpO.
 
   
 0.951
SEL26641.1
Gas vesicle protein K.
 
   
 0.950
gvpA
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
0.917
SEL26871.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.873
SEL26843.1
Hypothetical protein.
       0.542
SEK56950.1
NADH dehydrogenase.
       0.531
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.