STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL38528.1Protein of unknown function. (52 aa)    
Predicted Functional Partners:
SEL38551.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
  
    0.881
SEL38577.1
Hypothetical protein.
       0.785
SEL38594.1
Glyoxylase, beta-lactamase superfamily II.
       0.785
SEL38507.1
Anion-transporting ATPase, ArsA/GET3 family.
       0.774
SEK28863.1
Protein of unknown function.
  
     0.773
SEL38483.1
Anion-transporting ATPase, ArsA/GET3 family.
       0.638
SEK66814.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
       0.478
SEK89847.1
Protein of unknown function.
  
     0.467
SEL73938.1
Septum formation initiator.
  
     0.466
SEL39396.1
Helicase/secretion neighborhood CpaE-like protein.
  
     0.457
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.