STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL47235.1Imidazolonepropionase. (435 aa)    
Predicted Functional Partners:
SEL47272.1
Membrane dipeptidase.
 
     0.868
SEL10406.1
Urocanate hydratase.
  
 
 0.840
SEL84456.1
Urocanate hydratase.
  
 
 0.840
SEM47936.1
Urocanate hydratase.
  
 
 0.840
SEK33378.1
Histidine ammonia-lyase.
  
  
 0.746
hutH
Histidine ammonia-lyase.
  
  
 0.746
SEL84479.1
Histidine ammonia-lyase.
  
  
 0.746
SEM10468.1
Histidine ammonia-lyase/phenylalanine ammonia-lyase.
  
  
 0.746
SEL47214.1
DNA-binding transcriptional regulator, IclR family.
 
  
  0.629
SEL64744.1
Predicted arabinose efflux permease, MFS family.
  
     0.603
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.