STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL67091.1Serine protease, subtilisin family. (437 aa)    
Predicted Functional Partners:
SEL31204.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.793
SEM60949.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.793
SEL67074.1
Serine protease, subtilisin family.
 
    
0.783
SEL14974.1
Subtilase family protein.
  
     0.771
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.690
SEL67060.1
PPE family protein.
  
   0.604
SEL30031.1
Hypothetical protein.
   
  0.511
SEL62446.1
Hypothetical protein.
   
  0.511
SEL68989.1
Trypsin.
   
  0.511
SEM03766.1
Trypsin.
 
 
 0.507
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.