STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL91089.1Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. (318 aa)    
Predicted Functional Partners:
SEL91115.1
Quinol monooxygenase YgiN.
 
     0.813
SEL49112.1
AraC-type DNA-binding protein.
  
   0.614
SEK85599.1
AraC-type DNA-binding protein.
  
   0.604
SEM42550.1
AraC-type DNA-binding protein.
  
   0.579
SEM18300.1
Quinol monooxygenase YgiN.
 
     0.559
SEL30563.1
AraC-type DNA-binding protein.
  
   0.557
SEL91060.1
Acetyltransferase (GNAT) family protein.
       0.538
SEK90791.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
 
  
 
0.484
SEL69504.1
AraC-type DNA-binding protein.
  
   0.483
SEM03914.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
 
  
 
0.481
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.