STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM24111.1Hypothetical protein. (546 aa)    
Predicted Functional Partners:
SEM24106.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
       0.800
SEM24082.1
Hypothetical protein.
       0.715
SEM24126.1
Hypothetical protein.
       0.693
SEM24189.1
UPF0716 protein FxsA.
  
    0.565
SEM24145.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.491
SEM24156.1
Hypothetical protein.
       0.491
SEM45868.1
Hypothetical protein.
 
     0.460
SEL09088.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
     0.447
SEM60805.1
Hypothetical protein.
  
     0.433
SEL09101.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
     0.429
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.