STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM26556.1TIGR03086 family protein. (197 aa)    
Predicted Functional Partners:
SEM26538.1
Regulatory protein, tetR family.
 
     0.674
SEL04005.1
TIGR03086 family protein.
  
     0.657
SEM26520.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.645
SEL17670.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.634
SEM26576.1
Glyoxylase, beta-lactamase superfamily II.
       0.509
SEL87582.1
Hypothetical protein.
  
    0.455
SEL68817.1
TIGR03086 family protein.
  
     0.452
SEM30790.1
Peptidyl-tRNA hydrolase.
       0.439
SEK51016.1
Hypothetical protein.
  
     0.437
SEK87566.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.