STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM29997.1DNA-binding transcriptional regulator, PucR family. (551 aa)    
Predicted Functional Partners:
SEM29797.1
Peptide/nickel transport system substrate-binding protein.
 
    0.777
SEM29938.1
Predicted acetyltransferase, GNAT superfamily.
 
     0.760
SEM29848.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.739
SEM29925.1
Glutamate carboxypeptidase.
 
     0.701
SEM30109.1
Glutamate carboxypeptidase.
 
     0.677
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
     0.654
SEM29882.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
 
     0.653
SEM29903.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.639
SEM29819.1
Peptide/nickel transport system permease protein.
  
    0.561
SEM27726.1
Protein of unknown function.
  
     0.470
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.