STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM37182.1DNA-binding transcriptional regulator, LacI/PurR family. (344 aa)    
Predicted Functional Partners:
SEL72565.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.934
SEM26609.1
PTS system, beta-glucosides-specific IIC component.
    
 0.789
SEM10390.1
Condensation domain-containing protein.
    
   0.762
SEM40623.1
Thioesterase domain-containing protein.
    
   0.762
SEL21029.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.729
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
   0.723
pheT
phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.723
SEK89632.1
Phosphocarrier protein.
 
 
 
 0.690
SEM37146.1
Multiple sugar transport system permease protein.
 
     0.680
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.675
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.