STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM39666.1Hypothetical protein; Belongs to the GcvT family. (334 aa)    
Predicted Functional Partners:
SEL75840.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.915
SEM39639.1
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
 
    0.882
SEM39651.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
       0.878
SEM15320.1
Protein of unknown function.
  
     0.698
SEM39729.1
Asparaginase.
      0.666
SEK92136.1
Protein of unknown function.
  
     0.644
SEL62569.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
     0.551
SEM32869.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
     
 0.546
SEK92229.1
Chlorite dismutase.
  
     0.537
SEK23466.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.536
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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