STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM42566.1Polyketide cyclase / dehydrase and lipid transport. (148 aa)    
Predicted Functional Partners:
SEM42590.1
DNA-binding transcriptional regulator, MarR family.
 
    0.944
SEM42550.1
AraC-type DNA-binding protein.
       0.723
SEL37498.1
DNA-binding transcriptional regulator, MarR family.
 
    0.696
SEK58479.1
Hypothetical protein.
 
    0.547
SEL03130.1
Hypothetical protein.
 
    0.530
SEL64862.1
Zinc transporter, ZIP family.
 
    0.528
SEL93178.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
  
    0.504
SEM42528.1
NADPH:quinone reductase.
  
    0.479
SEM48687.1
Zinc transporter, ZIP family.
 
    0.451
SEK79273.1
Pyridoxamine 5'-phosphate oxidase.
   
    0.441
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.