STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM43905.1Cyclic nucleotide-binding domain-containing protein. (473 aa)    
Predicted Functional Partners:
SEL72565.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.902
SEL82575.1
Acyl transferase domain-containing protein.
 
 0.899
SEM43921.1
2-methylisoborneol synthase.
 
  
  0.899
SEK85255.1
Signal transduction histidine kinase.
   
 0.858
SEL14978.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
  
 0.837
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.831
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.825
SEL10136.1
Adenylate cyclase.
  
 0.825
SEL25175.1
HD domain-containing protein.
  
 0.824
SEM43941.1
Geranyl diphosphate 2-C-methyltransferase.
 
   
 0.816
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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