STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM48957.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (275 aa)    
Predicted Functional Partners:
SEM48933.1
Signal transduction histidine kinase.
 
 0.984
SEK85255.1
Signal transduction histidine kinase.
  
0.983
SEL09531.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.896
SEM40232.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.893
SEL41844.1
Two-component system, OmpR family, sensor histidine kinase PrrB.
 
 0.882
SEM39398.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.880
SEK92560.1
Signal transduction histidine kinase.
 0.874
SEL04285.1
Two-component system, OmpR family, sensor kinase.
 0.872
SEK70062.1
Two-component system, OmpR family, sensor kinase.
 0.870
SEM34298.1
PAS domain S-box-containing protein.
 0.868
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.