STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM56408.1Catechol 1,2-dioxygenase. (303 aa)    
Predicted Functional Partners:
SEM56388.1
Maleylacetate reductase.
 
 0.999
SEM10507.1
3-oxoadipate enol-lactonase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.943
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
 
 0.907
SEM46100.1
Carboxymethylenebutenolidase.
  
 
 0.873
SEM56373.1
Muconolactone delta-isomerase.
 
  
 0.867
SEL98085.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
     
 0.857
SEM15397.1
Carboxymethylenebutenolidase.
  
 
 0.841
SEL48601.1
Carboxymethylenebutenolidase.
   
 
 0.819
SEM03867.1
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.816
SEK48319.1
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.793
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.