STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM67230.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
SEK85255.1
Signal transduction histidine kinase.
   
 0.911
SEK69925.1
Signal transduction histidine kinase.
  
 0.509
SEL51525.1
Histidine kinase.
  
 0.509
SEM13042.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.495
SEM64481.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.470
SEM67258.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.452
SEM52626.1
Tetratricopeptide repeat-containing protein.
   
  0.442
SEL82617.1
Regulatory protein, luxR family.
  
  0.416
SEM67217.1
4-hydroxybenzoate polyprenyltransferase/chlorophyll synthase/homogentisate solanesyltransferase/geranylgeranylglycerol-phosphate geranylgeranyltransferase.
       0.413
SEK67947.1
PAS domain S-box-containing protein.
   
  0.409
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.