STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM68768.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
SEM71709.1
Chorismate mutase.
   
    0.755
SEL60326.1
Hypothetical protein.
  
     0.729
SEL97115.1
Putative Ig domain-containing protein.
  
     0.615
SEM19565.1
Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin.
  
     0.502
SEK51389.1
PKD repeat-containing protein.
  
     0.498
SEK55680.1
L,D-peptidoglycan transpeptidase YkuD, ErfK/YbiS/YcfS/YnhG family.
  
     0.498
SEM04414.1
Serine protease.
  
     0.490
SEM19410.1
Hypothetical protein.
  
     0.482
SEK95346.1
exo-1,4-beta-D-glucosaminidase.
  
     0.471
SEL59271.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.466
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.