STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM69755.1Predicted arabinose efflux permease, MFS family. (429 aa)    
Predicted Functional Partners:
SEK57328.1
Transmembrane secretion effector.
  
     0.773
SEL64782.1
Predicted arabinose efflux permease, MFS family.
  
     0.773
SEM56660.1
MFS-type transporter involved in bile tolerance, Atg22 family.
  
     0.771
SEK96292.1
Major Facilitator Superfamily protein.
  
     0.767
SEM00229.1
Predicted arabinose efflux permease, MFS family.
  
     0.766
SEL64732.1
Fucose permease.
  
     0.765
SEM10159.1
Predicted arabinose efflux permease, MFS family.
  
     0.761
SEK95450.1
Predicted arabinose efflux permease, MFS family.
  
     0.758
SEL94765.1
Predicted arabinose efflux permease, MFS family.
  
     0.755
SEL92327.1
Major Facilitator Superfamily protein.
  
     0.717
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.