STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM84427.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SEM84406.1
Hypothetical protein.
       0.773
SEM71019.1
Hypothetical protein.
  
     0.769
SEM84451.1
Hypothetical protein.
       0.701
SEM84480.1
Acyl-CoA dehydrogenase.
       0.701
SEL39681.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.700
SEM84493.1
Hypothetical protein.
 
     0.673
SEL73313.1
Hypothetical protein.
  
     0.660
SEM84521.1
Hypothetical protein.
       0.630
SEM84544.1
Protein of unknown function.
       0.630
SEM84563.1
Roadblock/LC7 domain-containing protein.
       0.630
Your Current Organism:
Streptacidiphilus jiangxiensis
NCBI taxonomy Id: 235985
Other names: JCM 12277, NBRC 100920, S. jiangxiensis, Streptacidiphilus jiangxiensis Huang et al. 2005, strain 33214
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.