Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADG881_553 | EDX89101.1 | ADG881_553 | ADG881_1203 | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.955 |
ADG881_553 | EDX91053.1 | ADG881_553 | ADG881_3155 | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Transposase IS116/IS110/IS902 family protein; [L] COG3547 Transposase and inactivated derivatives. | 0.555 |
EDX89101.1 | ADG881_553 | ADG881_1203 | ADG881_553 | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.955 |
EDX89101.1 | EDX90158.1 | ADG881_1203 | ADG881_2260 | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.811 |
EDX89101.1 | EDX91053.1 | ADG881_1203 | ADG881_3155 | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Transposase IS116/IS110/IS902 family protein; [L] COG3547 Transposase and inactivated derivatives. | 0.555 |
EDX90158.1 | EDX89101.1 | ADG881_2260 | ADG881_1203 | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.811 |
EDX91053.1 | ADG881_553 | ADG881_3155 | ADG881_553 | Transposase IS116/IS110/IS902 family protein; [L] COG3547 Transposase and inactivated derivatives. | [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.555 |
EDX91053.1 | EDX89101.1 | ADG881_3155 | ADG881_1203 | Transposase IS116/IS110/IS902 family protein; [L] COG3547 Transposase and inactivated derivatives. | Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. | 0.555 |