STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX89101.1Integrase core domain protein; [L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name. (280 aa)    
Predicted Functional Partners:
ADG881_553
[L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name.
    0.955
EDX90158.1
[L] COG2801 Transposase and inactivated derivatives; overlaps another CDS with the same product name.
    0.811
EDX91053.1
Transposase IS116/IS110/IS902 family protein; [L] COG3547 Transposase and inactivated derivatives.
  
    0.555
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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