STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX89777.1Rickettsia 17 kDa surface antigen family; [S] COG3134 Predicted outer membrane lipoprotein. (176 aa)    
Predicted Functional Partners:
EDX90343.1
Anti sigma-E protein RseA, N-terminal domain; [T] COG3073 Negative regulator of sigma E activity.
  
    0.693
EDX91114.1
4'-phosphopantetheinyl transferase superfamily; [Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
  
     0.630
EDX90138.1
[S] COG3105 Uncharacterized protein conserved in bacteria.
  
     0.521
ADG881_410
Hydrolase, NUDIX family, putative; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.450
ADG881_816
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.447
EDX89107.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.438
EDX90315.1
Conserved hypothetical protein TIGR00147; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.
  
   
 0.432
EDX90927.1
Conserved hypothetical protein TIGR02099; [S] COG3164 Predicted membrane protein.
  
     0.421
EDX90718.1
Poly(hydroxyalkanoate) granule-associated protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.418
ADG881_198
[R] COG3313 Predicted Fe-S protein.
  
     0.417
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.