Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX89042.1 | EDX90058.1 | ADG881_1144 | ADG881_2160 | HipA-like C-terminal domain family; [R] COG3550 Uncharacterized protein related to capsule biosynthesis enzymes. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.580 |
EDX89603.1 | EDX90058.1 | ADG881_1705 | ADG881_2160 | Hypothetical protein. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.479 |
EDX89603.1 | EDX90512.1 | ADG881_1705 | ADG881_2614 | Hypothetical protein. | Hypothetical protein. | 0.642 |
EDX89933.1 | EDX90058.1 | ADG881_2035 | ADG881_2160 | Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.450 |
EDX90058.1 | EDX89042.1 | ADG881_2160 | ADG881_1144 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | HipA-like C-terminal domain family; [R] COG3550 Uncharacterized protein related to capsule biosynthesis enzymes. | 0.580 |
EDX90058.1 | EDX89603.1 | ADG881_2160 | ADG881_1705 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.479 |
EDX90058.1 | EDX89933.1 | ADG881_2160 | ADG881_2035 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases. | 0.450 |
EDX90058.1 | EDX90512.1 | ADG881_2160 | ADG881_2614 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.408 |
EDX90058.1 | argA | ADG881_2160 | ADG881_1579 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Amino-acid N-acetyltransferase; [E] COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.488 |
EDX90058.1 | aroA | ADG881_2160 | ADG881_858 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 3-phosphoshikimate 1-carboxyvinyltransferase, putative; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.742 |
EDX90512.1 | EDX89603.1 | ADG881_2614 | ADG881_1705 | Hypothetical protein. | Hypothetical protein. | 0.642 |
EDX90512.1 | EDX90058.1 | ADG881_2614 | ADG881_2160 | Hypothetical protein. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.408 |
argA | EDX90058.1 | ADG881_1579 | ADG881_2160 | Amino-acid N-acetyltransferase; [E] COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.488 |
argA | aroA | ADG881_1579 | ADG881_858 | Amino-acid N-acetyltransferase; [E] COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | 3-phosphoshikimate 1-carboxyvinyltransferase, putative; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.443 |
aroA | EDX90058.1 | ADG881_858 | ADG881_2160 | 3-phosphoshikimate 1-carboxyvinyltransferase, putative; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.742 |
aroA | argA | ADG881_858 | ADG881_1579 | 3-phosphoshikimate 1-carboxyvinyltransferase, putative; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Amino-acid N-acetyltransferase; [E] COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.443 |