STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX90070.1FGGY family of carbohydrate kinase, C-terminal domain protein; [H] COG0853 Aspartate 1-decarboxylase. (521 aa)    
Predicted Functional Partners:
EDX90194.1
FAD dependent oxidoreductase domain protein; [C] COG0578 Glycerol-3-phosphate dehydrogenase.
 
 0.985
EDX90596.1
[G] COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.984
EDX90065.1
FAD linked oxidase, C-terminal domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
 
   
 0.943
EDX89644.1
Alcohol dehydrogenase GroES-like domain family; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
 
 0.844
EDX89321.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.836
mtnB
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.
  
 
 0.759
EDX90360.1
Class II Aldolase and Adducin N-terminal domain, putative; [G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 
 0.663
ADG881_637
MerR, DNA binding family; [K] COG0789 Predicted transcriptional regulators.
       0.660
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
0.648
EDX89883.1
Hypothetical protein.
       0.609
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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