STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX90652.1NAD binding domain of 6-phosphogluconate dehydrogenase family; [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases. (304 aa)    
Predicted Functional Partners:
EDX90150.1
[G] COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 0.926
djlA
DnaJ domain protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.
       0.778
EDX90356.1
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
   
 
 0.739
EDX90917.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.739
ADG881_955
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
 
 0.739
EDX89619.1
[E] COG0077 Prephenate dehydratase.
   
 
  0.687
EDX90504.1
[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
  
  
 
0.630
EDX90708.1
enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 
  0.624
ADG881_436
Putative quinone oxidoreductase, YhdH/YhfP family; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
  
  0.567
ADG881_144
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, putative; [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
  0.539
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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