STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX90948.1Outer membrane insertion C-terminal signal domain protein. (170 aa)    
Predicted Functional Partners:
ADG881_595
[M] COG2825 Outer membrane protein; Belongs to the skp family.
    
 
 0.488
EDX89855.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
       0.462
EDX89030.1
Hypothetical protein.
    
 
 0.451
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.