STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX91228.1Putative phage-type endonuclease domain protein; [L] COG5377 Phage-related protein, predicted endonuclease. (335 aa)    
Predicted Functional Partners:
EDX89895.1
Phage/plasmid-related protein TIGR03299.
 
     0.909
EDX91164.1
Hypothetical protein.
 
     0.880
EDX89641.1
Phage/plasmid-related protein TIGR03299.
  
     0.774
EDX90688.1
Hypothetical protein.
  
     0.774
EDX90723.1
Phage/plasmid-related protein TIGR03299.
  
     0.774
ADG881_787
Hypothetical protein.
  
     0.774
EDX89312.1
Hypothetical protein.
       0.773
EDX90275.1
[L] COG2003 DNA repair proteins; Belongs to the UPF0758 family.
       0.411
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.