STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG881_552Hypothetical protein; [I] COG3000 Sterol desaturase. (307 aa)    
Predicted Functional Partners:
ADG881_930
[Q] COG2124 Cytochrome P450.
  
 0.587
EDX90918.1
3-beta hydroxysteroid dehydrogenase/isomerase family; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  0.569
EDX89064.1
Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases.
   
 0.527
EDX89115.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
       0.527
EDX89547.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
  0.510
EDX89548.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
  0.510
EDX90373.1
FAD binding domain protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
  0.510
EDX90571.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
  0.510
EDX90958.1
Hypothetical protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD binding domain, putative.
   
  0.510
EDX89567.1
Fatty acid desaturase domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.496
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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