STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG881_716LysR substrate binding domain protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
EDX90796.1
Transcriptional regulator, LysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.746
EDX89918.1
Transcriptional regulator, LysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.697
EDX89256.1
LysR substrate binding domain protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.610
EDX88959.1
LysR substrate binding domain protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.601
EDX89228.1
LysR substrate binding domain protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.549
EDX91009.1
[I] COG2067 Long-chain fatty acid transport protein.
       0.519
EDX88928.1
Hypothetical protein.
       0.509
EDX89088.1
LysR substrate binding domain protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.493
EDX89786.1
Hypothetical protein.
       0.474
ADG881_950
Hypothetical protein; [K] COG0583 Transcriptional regulator; LysR substrate binding domain, putative; Belongs to the LysR transcriptional regulatory family.
  
     0.467
Your Current Organism:
Alcanivorax sp. DG881
NCBI taxonomy Id: 236097
Other names: A. sp. DG881
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