STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_930007Very-long-chain acyl-synthetase family protein. (689 aa)    
Predicted Functional Partners:
BKCO1_2900030
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.891
BKCO1_1180008
Fungal specific transcription protein.
    
 0.868
BKCO1_1300095
Kinesin-like protein klpa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.868
BKCO1_3000099
Uba ts-n domain protein.
    
 0.858
BKCO1_140003
Transcriptional corepressor cyc8.
    
 0.858
BKCO1_650009
Ankyrin.
    
 0.809
BKCO1_3900034
Btb poz domain protein.
    
 0.750
BKCO1_2000122
Btb poz-like protein.
    
 0.750
BKCO1_3900033
Btb poz domain protein.
    
 0.750
BKCO1_2300019
Btb poz-like protein.
    
 0.750
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.