STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_8600026Microsomal signal peptidase 25 kDa subunit. (221 aa)    
Predicted Functional Partners:
BKCO1_10400018
Microsomal signal peptidase 12kda subunit.
   
 0.994
BKCO1_3400088
Signal peptidase subunit 3.
   
 0.994
BKCO1_200071
Signal peptidase complex catalytic subunit SEC11.
   
 0.983
BKCO1_10000164
Uncharacterized protein.
   
 0.980
BKCO1_10400020
Proteophosphoglycan 5.
   
 0.948
BKCO1_930002
Phosphotransferase enzyme family protein.
   
 0.923
BKCO1_6000020
Signal peptidase.
   
 0.854
BKCO1_23000132
Mitochondrial inner membrane protease subunit 2.
   
 0.854
BKCO1_480005
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.766
BKCO1_19000169
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 0.701
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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